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Publications in Journals
2024
- Rani, A, Pandey J.P., Rajawat D., Pandey D.M., Chowdary N.B. (2024) The tasar silk industry: A gateway to a plethora of opportunities. Plant Archives 24, Special Issue (VS): 247-266. http://dx.doi.org/10.51470/PLANTARCHIVES.2024.v24.specialissue.040. (IF=0.3).
- Ekta, Singh A.K., Panda S.K., *Pandey D. M. (2024) Transcriptome analyses revealed differential gene expression patterns in contrasting rice landraces as a response to acidic or proton toxicity stress. Current Plant Biology. Vol: 39: 100368. Available online 2 July 2024. https://doi.org/10.1016/j.cpb.2024.100368. (IF=5.4).
- Rani, A, Pandey D.M., Pandey J.P. (2024) Identification of cocoonase and cocoonase like protein using polyclonal antibody of Antheraea mylitta cocoonase. Biotechnology Letters (Feb 2024). 46(1):47-54. Doi: 10.1007/s10529-023-03447-y. (IF=2.7).
- Rani, A, Pandey D.M., Pandey J.P. (2024) Biomolecular characterization of Antheraea mylitta cocoonase: A secreted protease. Analytical Biochemistry. (Nov 2023) Vol: 686 (March-2024), 115408. https://doi.org/10.1016/j.ab.2023.115408 (DOI:10.1016/j.ab.2023.115408) (IF=2.9).
2023
- Kumar G, Pandey DM, Ghosh M, Dall'Acqua S, Gupta R, Tiwari NP, Mohd Siddique U, Vishwakarma L, Guleri SK, Lal UR, Dubey S. (2023) Karanjin, A Promising Bioactive Compound Possessing Anti-cancer Activity against Experimental Model of Non-small Cell Lung Cancer Cells. Anti-Cancer Agents in Medicinal Chemistry. (Nov 6, 2023). https://pubmed.ncbi.nlm.nih.gov/37936467/ doi: 10.2174/0118715206255557231024095245. PMID: 37936467. (IF=2.8).
- Kumari G., Nigam V., Pandey D.M. (2023). Mutational analysis of flavonol synthase of M. pinnata towards enhancement of binding affinity: a computational approach. Journal of biomolecular Structure & Dynamics (Aug 2023) DOI:10.1080/07391102.2023.2246588 (IF=4.4).
- Rani, A, Pandey J.P., Jena, K., Sathayanarayana, K., Pandey D.M. (2023) Antheraea mylitta cocoonase: An explorable protease. Journal of Environmental Biology 44(3(SI)): 472-478. (June 2023). DOI: 10.22438/jeb/44/3(SI)/JEB-12. (IF = 0.703).
- Karan B., Mahapatra S., Sahu S.S., Pandey D.M., Chakravarty S. (2023) Computational models for prediction of protein-protein interaction in rice and Magnaporthe grisea. Front. Plant Sci. (Sec. Plant Bioinformatics). 13: 1046209. doi: 10.3389/fpls.2022.1046209. (IF=6.627).
- *Pandey D.M, Singh A.K., Chaturvedi R. (2023) Editorial: “Developing stress resilient crops, improving agri-food industry and healthcare products” J. Biotech 363: 17-18. https://doi.org/10.1016/j.jbiotec.2023.01.001 (SCI, IF=3.595).
2022
- Sneha, Pandey J.P., *Pandey D.M. (2022) Evaluating the role of trypsin in silk degumming: An in silico approach. J. Biotech. 359: 35-47. https://doi.org/10.1016/j.jbiotec.2022.09.007 (IF=3.595).
- *Pandey D.M., Hu Y.-G., Shavrukov Y., Gupta N.K. (2022) Editorial: Drought Threat: Responses and molecular-genetic mechanisms of adaptation and tolerance in wheat. Front. Plant Sci. 13: 960162. https://doi.org/10.3389/fpls.2022.960162. (IF=6.627).
- Kumari G., Nigam V.K., *Pandey D.M. (2022) The molecular docking and molecular dynamics study of flavonol synthase and flavonoid 3’-monooxygenase enzymes involved for the enrichment of kaempferol. Journal of Biomolecular Structure and Dynamics. DOI: https://doi.org/10.1080/07391102.2022.2033324) (IF=3.392).
- Prasad D, Mani NK, *Pandey D.M (2022) CRISPR/Cas Technology: Opportunities for Phytopathogenic Viruses detection. J. Biotech. 360: 211-217. DOI: 10.1016/j.jbiotec.2022.11.010 (IF=3.595).
- Singh RP, Pandey D.M., Jha PN, Ma Y (2022) ACC deaminase producing rhizobacterium Enterobacter cloacae ZNP-4 enhance abiotic stress tolerance in wheat plant. PLoS ONE 17(5): e0267127. https://doi.org/10.1371/journal.pone.0267127. (IF=3.24).
- Sneha, *Pandey D.M. (2022) In silico structural and functional characterization of Antheraeamylitta cocoonase. Journal of Genetic Engineering and Biotechnology 20: 102. DOI: 10.1186/s43141-022-00367-8 (Scopus)
2021
- Tiwari N.P., Pandey J.P., *Pandey D.M. (2021) Protein-protein docking and molecular dynamics studies of sericin and cocoonase of silkworm: An insight for cocoon softening. Journal of Biomolecular Structure and Dynamics. TBSD 2017352. DOI: https://doi.org/10.1080/07391102.2021.2017352
- Ekta, Singh A.K., *Pandey D.M. (2021) Co-expression network analysis of acidic-responsive genes in Arabidopsis thaliana signifies hub genes expression and their key role assessment for acidity tolerance in Oryza sativa L. Biologia. https://doi.org/10.1007/s11756-021-00837-3.
- Ekta, Singh A.K., *Pandey D.M. (2021) Microstructural changes in rice (Oryza sativa L.) leaves under varying low pH levels: a swept-source optical coherence tomography approach. Laser Physics 31(8): 5601. https://doi.org/10.1088/1555-6611/ac0832.
- Anand P., Pandey J.P., *Pandey D.M. (2021) Study on cocoonase, sericin and degumming of silk cocoon: Computational and experimental. Journal of Genetic Engineering and Biotechnology 19: 32. https://doi.org/10.1186/s43141-021-00125-2
2020
- Kumari R, Bharti B, *Pandey DM (2020) Differential expression of some genes and their in-silico analysis in rice varieties under cold stress. Research Journal of Biotechnology. 15(6): 53-66).
- Pandey B, Gupta S, Rao AR, *Pandey DM, Chatrath R (2020) Extrapolating the effect of nonsynonymous SNP in bread wheat HSP16.9B gene: a molecular modeling and dynamics study. IJBRA 16(1) 101-116.
- Smita S, Katiyar A, Dalal M, Lenka SK, Kumar A, Mahtha SK, Yadav G, Chinnusamy V, Pandey DM, Bansal KC (2020) Gene network modules associated with abiotic stress response in tolerant rice genotypes identified by transcriptome meta-analysis. Functional & Integrative Genomics. 20, 29–49. https://doi.org/10.1007/s10142-019-00697-w.
2019
- Anand P, Singh S, Prajapati GK, *Pandey DM (2019) Computational characterization of lipoxygenase and hydroperoxide lyase enzymes and Real Time PCR-based expression analysis of their encoding genes in peanut under heat and drought stress. Research Journal of Biotechnology. 14(12): 47-55).
- Kumar G., Gupta R., Sharan S., Roy P., *Pandey D.M. (2019) Anticancer activity of plant leaves extract collected from a tribal region of India. 3Biotech. 9(11):399. DOI:10.1007/s13205-019-1927-x.
- Ram MK, Mukherjee K, *Pandey DM (2019) Identification of miRNA, their targets and miPEPs in peanut (Arachis hypogaea L.). Computational Biology Chemistry. 83: 107100. DOI_10.1016/j.compbiolchem.2019.107100.
- Prajapati GK, Pandey B, Mishra AK, Baek K-H, *Pandey DM (2019) Identification of GCC-box and TCC-box motifs in the promoters of differentially expressed genes in rice (Oryza sativa L.): Experimental and computational approaches. PLoS ONE 14(4): e0214964. https://doi.org/10.1371/journal.pone.0214964.
- Kumar G, Ghosh M, *Pandey DM (2019) Method development for optimized green synthesis of gold nanoparticles from Millettia pinnata and their activity in Non-small cell lung cancer cell lines. IET Nanobiotechnology. DOI: 10.1049/iet-nbt.2018.5410.
2018
- Deo A.S., Prasad S., Ram M.K., Sinha A.K., Pandey J.P., *Pandey D.M. (2018) A computational approach to study the ESTs, miRNA and SNPs in Antheraea mylitta. International Journal of Computational Bioinformatics and In Silico Modeling. 7(4): 1002-1017.
- Pandey J.P., Sinha A.K. Jena K., Gupta V.P., Kundu P., Pandey D.M. (2018) Prospective utilization of Antheraea mylitta cocoonase and its molecular harmony with nature. Int. J. Adv. Res. 6(6), 1014-1019.
- Shamim G., Pandey D.M., Sharma, K.K., Ramani, R (2018) Antifeedant effect of water-soluble anthraquinone pigment of Kerria lacca. J. Bio-Sci. 25: 77-81.
2016
- Shamim G., Pandey D.M., Sharma K.K., Ramani R. (2016) Genes involved in the biosynthesis of lac dye constituents in Indian lac insect, Kerria lacca (Kerr). J. Entomol. Res. Soc. 18(1): 07-17.
- Shamim G., Ranjan S.K., Pandey D.M., Sharma, K.K., Ramani, R (2016) Lac dye as a potential anti-neoplastic agent. Journal of Cancer Research and Therapeutics. 12(2): 1033-1035.
- Pandey B., Gupta S., Rao R.R., Pandey D.M., Chatrath R. (2016) Molecular modeling and dynamics study of nonsynonymous SNP in bread wheat HSP16.9B gene. In Proceedings of International Conference on Bioinformatics and Systems Biology (BSB-2016) scheduled at Varanasi, UP, India from March 04-06, 2016. PP 31. IEEE Publisher. [Full Paper]
2015
- Smita S., Katiyar A., Chinnusamy V., Pandey D.M., Bansal K.C. (2015) Transcriptional regulatory network analysis of MYB transcription factor family genes in rice. Front. Plant Sci. 6: 1157. doi: 10.3389/fpls.2015.01157.
- Wany A., Nigam, V.K., *Pandey D.M. (2015) Evolutionary evidence for the prevalence of TY3 GYPSY sub-class retrotarnsposons during annotation of geraniol-dehydrogeanse gene in Java citronella (Cymbopogon winterianus Jowitt). International Journal Pharma Biosciences 6(3): (B) 58-80.
- Katiyar A., Smita S., Muthusamy S.K., Chinnusamy V., Pandey D.M., Bansal K.C. (2015) Identification of novel drought-responsive microRNAs and trans-acting siRNAs from Sorghum bicolor (L.) Moench by high-throughput sequencing analysis. Front. Plant Sci. 6: 506. doi: 10.3389/fpls.2015.00506.
- Kumar A., Pandey D.M., Ramachandran P., Abraham T., Mathew J., Jyothsna P., Malathi V.G. (2015) Molecular characterization of viroid associated with Tapping Panel Dryness (TPD) syndrome of Hevea brasiliensis from India. Current Science. 108(8): 1520-1527.
- Mishra A., Sachan, S.G. and *Pandey D.M. (2015) Maize rhizosphere microbial population in soils of Jharkhand ". IJPPS 7(4): 218-222.
- Prajapati G.K. and *Pandey D.M. (2015) Molecular Beacon probe based promoter motifs validation in anoxia responsive DEGs and their in silico interaction studies with AP2/EREBP TF in rice (Oryza sativa L.)". IJPPS 7(3): 123-130.
2014
- Mukherjee K., Pandey D.M., Vidyarthi A.S. (2014) In silico characterization and analysis of RTBP1 and NgTRF1 protein through MD simulation and molecular docking - A comparative study. Interdisciplinary Sciences-Computational Life Sciences. 6: 1-13.
- *Pandey D.M. and Pandey J.P. (2014) Cocoonase Enzyme: Current and Future Perspectives. Austin J Biotechnol Bioeng. 1(3): 2.
- Ranjan A., Kumari A., *Pandey D.M. (2014) Annotation of stress responsive candidate genes in peanut ESTs. Interdisciplinary Sciences- Computational Life Sciences. 6: 1-9.
- Shamim S., Pandey D.M., Ramani R., Sharma K.K. (2014) Identification of genes related to resin biosynthesis in the Indian lac insect, Kerria lacca (Hemiptera: Kerriidae). International Journal of Tropical Insect Science. 34(2): 149-155.
- Shamim G., Ranjan S.K., Pandey D.M., and Ramani R. (2014) Biochemistry and biosynthesis of insect pigments. European Journal of Entomology. 111(2): 149-164.
- Wany A., Nigam V.K., *Pandey D.M. (2014). Understanding new paradigm of plant metabolomes through secondary metabolite enrichment. Research Journal of BioTechnology 9(4): 90-98.
- Wany A., Kumar A. Nallapeta S., Nigam V.K., *Pandey D.M. (2014) Extraction and characterization of essentail oil components based on geraniol and citronellol from Java Citronella (Cymbopogon winterianus Jowitt). Plant Growth Regulation 73(2): 133-145.
- Pandey B, Pandey D.M., Sharma I, Sharma P (2014). Isolation and characterization of Dehydration Responsive Element Binding Factor 2 (DREB2) from Indian wheat (Triticum aestivum L.) cultivars. Australian Journal of Crop Science. 8(1):44-54.
- Mukherjee K., Pandey D.M., Vidyarthi A.S. (2014). 3D Structure Modeling of Human Telomere Repeat Binding Factor 2 and DNA-Protein Docking Studies. British Biotechnology Journal. 4(1): 81-95.
2013
- *Pandey D.M. (2013) Editorial: Improving crop productivity using modern biotechnology methods. J. Advancement in Medical and Life Sciences. V1-I1.
- Kumari A., *Pandey D.M. (2013) Differential gene expression analysis of some least studied transcription factors/regulators in rice during abiotic stresses. International Journal of Advanced Research 1(8): 412-422.
- Pandey B, Pandey, D.M., Sharma I, Sharma P. (2013) Identification of new aquaporin genes and SNP in bread wheat. Evolutionary Bioinformatics 9: 437–452.
- Wany A., Jha S., Nigam V.K., *Pandey D.M. (2013) Chemical analysis and therapeutic uses of citronella oil from Cymbopogon winterianus: A short review. International Journal of Advanced Research. 1(6): 504-521
- Prajapati G.K., Kashyap N., Kumar A., *Pandey D.M. (2013) Identification of GCC box in the promoter region of ubiquinol cytochrome C chaperone gene using Molecular Beacon probe and its in silico protein-DNA interaction study in rice (Oryza sativa L.). Int J Comput Bioinfo In Silico Model. 2: 213-222.
- Lata S., *Pandey D.M., Pandey J.P. (2013) Unraveling the sequence similarities, conserve domain and 3D structure of cocoonase to gain insights into their functional integrity. Int J Comput Bioinfo In Silico Model. 2: 141-146.
- Mukherjee K., Abhipriya, Vidyarthi A. S., Pandey, D.M. (2013) SVM based model generation for binding site prediction on helix turn helix motif type of transcription factors in eukaryotes. Bioinformation 9(10): 500-505.
- Rani N., Wany A., A.S. Vidyarthi, *Pandey D. M. (2013) Study of Citronella leaf based herbal mosquito repellents using natural binders. Current Research in Microbiology and Biotechnology 1(3): 98-103.
- Wany A., Kumar A., Nigam V.K., and *Pandey D. M. (2013) Isolation and in-silico characterization of geraniol dehydrogenase encoding gene using modified DNA extraction protocol from American basil (Ocimum americanum L.). Int J Pharm Bio Sci 4(3): (B) 365-379.
- *Pandey DM and Kumar A (2013). 3D structure prediction and protein-DNA interaction of CCCH-type zinc finger transcription factor gene in Rice (Oryza sativa L.). Int J Comput Bioinfo In Silico Model 2(2): 94-103.
- Kumar A., Pandey D.M., Abraham T., Mathew J., Ramachandran P., Malathi V.G. (2013). Determination of biotic aetiology of tapping panel dryness (TPD) syndrome of rubber tree (Hevea brasiliensis) by return-polyacrylamide gel electrophoresis (R-PAGE) technique. Archives of Phytopathology and Plant Protection, DOI:10.1080/03235408.2012.750814.
- Pandey B., Gupta O.P., Pandey D.M., Sharma I., Sharma P. (2013) Identification of new microRNAs and their targets in wheat using computational approach. Plant Signaling & Behavior. 8: e23932.
- Smita S., Katiyar A., Pandey D.M., Chinnusamy V., Archak S., Bansal K.C. (2013) Identification of conserved drought stress responsive gene-network across tissues and developmental stages in rice. Bioinformation 9(2): 072-078.
- Kumari A., Kumar A., *Pnadey D.M. (2013) In silico analysis of some least studied transcription factors/regulators in rice during abiotic stress. International Journal of Computational Bioinformatics and In Silico Modeling 2(1): 72-80.
- *Pandey D.M., Vidyarthi A.S., Nigam V.K., Prasad D., Ramani R., Prasad B.C., Das R., Kumar A., Prajapati G.K., Kumari A., Wany A. (2013) Meeting report: International symposium on plant biotechnology towards tolerance to stresses and enhancing crop yield (ISPB-2011). Current Research in Microbiology and Biotechnology 1(1): 16-22.
2012
- Pandey D.M., Kim S.-R. (2012) Identification and expression analysis of hypoxia stress inducible CCCH-type zinc finger protein genes in rice. J. Plant Biol. 55:489-497.
- Kumari A., Kumar A., Wany A., Prajapati G. K. *Pandey D. M. (2012) Identification and annotation of abiotic stress responsive candidate genes in peanut ESTs. Bioinformation 8(24): 1211-1219.
- Pandey B., Sharma P., Pandey D. M., Varshney J., Sheoran S., Singh M., Singh R., Sharma I., Chatrath R. (2012) Comprehensive computational analysis of different classes of Glutathione S-transferases in Triticum aestivum L. Plant Omics Journal 5(6): 518-531 (2012)
- Mukherjee K., Pandey D. M. and Vidyarthi A.S. (2012) Molecular Dynamics Simulation of Rap1 Myb-type domain in Saccharomyces cerevisiae. Bioinformation 8(18): 881-885.
- Katiyar A., Smita S., Pandey D. M., Chinnusamy V. and Bansal K.C. (2012) Identification of miRNAs in sorghum by using bioinformatics approach. Plant Signaling & Behavior 7(2): 1–14.
2011
- Sahu D., Kumar A. and *Pandey D.M. (2011) In silico analysis of enzyme involved in enrichment of citronella oil. Int. J. Computational Biology and Drug Design. 4(4): 332–344.
- Smita S., Katiyar A., Pandey D. M., Chinnusamy V. and Bansal K. C. (2011) Expression Network Analysis of Abiotic Stress Responsive Myb in Rice. In: Proceedings of The 2011 International Conference on Bioinformatics & Computational Biology (BIOCOMP-2011) from July 18-21, 2011 at Las Vegas Nevada, USA. Editors: Hamid R. Arabnia and Quoc-Nam Tran. CSREA Press, USA. Pp 655 [Full Paper].
- Katiyar A., Smita S., Pandey D. M., Chinnusamy V. and Bansal K.C. (2011) A Bioinformatics Approach for Identification of Type III Signal Anchored Proteins in Rice. In: Proceedings of The 2011 International Conference on Bioinformatics & Computational Biology (BIOCOMP-2011) from July 18-21, 2011 at Las Vegas Nevada, USA. Editors: Hamid R. Arabnia and Quoc-Nam Tran. CSREA Press, USA. Pp 706 [Full Paper].
- Mukherjee K., Kumar A., Pandey D.M. and Vidyarthi A.S. (2011) Study of rice telmere binding protein 1 (Rtbp 1): An in silico approach. Int. J. Pharm. Sci. Review Res. 10(1): 193-197.
- Kumar A., Barik A., Kumari M., Vidyarthi A.S. and *Pandey D. M. (2011) In silico prediction and identification of anoxia responsive single exon genes and their expressed proteins in rice (Oryza sativa L.). Int. J. Bioinformatics Research and Applications. 7(4): 376–389.
2010
- Singh N., Dang T. T. M., Vergara G.V., Pandey D. M., Sanchez D., Neeraja C. N., Septiningsih E.M., Mendioro M., Tecson-Mendoza E. M., Ismail A.M., Mackill D. J., Heuer S. (2010). Screening for novel sources of submergence tolerance using gene-based Sub1 molecular markers. Theor Appl Genet 121: 1441-1453.
2009
- Kumar A., Smita S., Sahu N., Shankaracharya, Vidyarthi A. S., *Pandey D. M. (2009) In Silico analysis of motifs in promoters of differentially expressed genes in rice (Oryza sativa L.) under anoxia. Intern. J. Bioinformatics. Res. & Appl. 5(5): 525-547.
- Pandey D. M., Choi I., Yeo U. -D. (2009) Photosystem 2-activity and thylakoid membrane polypeptides of in vitro cultured chrysanthemum as affected by NaCl. Biol. Plant. 53: 329-333.
2008
- Pandey D. M., Yeo U. –D. (2008) Stress-induced degradation of D1 protein and its photoprotection by DCPIP in isolated thylakoid membranes of barley leaf. Biol. Plant. 52: 291-298.
2006
- Pandey D. M., Yu K. W., Wu R. Z., Hahn E. –J., Paek K. -Y. (2006) Effects of different irradiances on the photosynthetic process during ex-vitro acclimation of Anoectochilus plantlets. Photosynthetica 44: 419-424.
- Thanh N. T., Murthy H. N., Pandey D. M., Yu K. W., Hahn E. –J., Paek K.Y. (2006) Effect of carbon dioxide on cell growth and saponin production in suspension cultures of Panax ginseng. Biol. Plant. 50: 752-754.
- Pandey D. M., Kim J. –W., Lee W. -S., Yeo U. -D. (2006) Changes in the photosynthetic pigments and RuBPcase activity during the development of globular somatic embryo into the plantlet of Siberian ginseng. Photosynthetica 44: 221-226.
- Pandey D. M., Yu K. W., Wu R. Z., Hahn E. –J., Paek K. –Y. (2006) Drought effect on electrophoretic protein pattern of Anoectochilus formosanus. Sci. Horti. 107: 205-209.
2000-2005
- Pandey D. M., Kang K. H. and Yeo U. –D. (2005) Effects of excessive photon on the photosynthetic pigments and violaxanthin de-epoxidase activity in the xanthophyll cycle of spinach leaf. Plant Sci. 168: 161-166.
- Cui Y. –Y., Pandey D. M., Hahn E. –J. and Paek K. –Y. (2004) Effect of drought on physiological aspects of Crassulacean acid metabolism in Doritaenopsis. Plant Sci. 167: 1219-1226.
- Pandey D. M., Kim K. H., Kang K. H. and Yeo U. -D. (2004) High irradiance effects on the xanthophyll cycle pigments and the activity of violaxanthin de-epoxidase in soybean callus. Photosynthetica 42: 153-156.
- Yeo U. –D., Pandey D. M., and Kim K. H. (2004) Long-term effect of growth regulators on the turnover of symplastic and apoplastic sugars in the suspension-subculture of kidney bean. J. Plant Biol. 47: 21-26.
- Pandey D. M., Goswami C. L. and Kumar B. (2003-04) Physiological effects of plant hormones in cotton under drought. Biol. Plant. 47: 535-540.
- Pandey D. M., Kim K. H. and Yeo U. -D. (2003). Dynamic changes of photosynthetic pigments in soybean callus under high irradiance. Photosynthetica 41: 311-314.
- Pandey D. M., Goswami C. L., Kumar B. and Jain S. (2002) Effect of growth regulators on photosynthetic metabolites in cotton under water stress. Biol. Plant. 45: 445-448.
- Kumar B., Pandey D. M., Goswami C. L. and Jain S. (2001) Effect of growth regulators on photosynthesis, transpiration and related parameters in water stressed cotton. Biol. Plant. 44: 475-478.
- Pandey D. M., Goswami C. L., Kumar B. and Jain S. (2000) Hormonal regulation of photosynthetic enzymes in cotton under water stress. Photosynthetica 38: 403-407.
1997-2002
- Pandey D. M. (2002) Chlorophyll content in three sugarcane (Saccharum offcinarum L.) cultivars. GEOBIOS 29: 148-150.
- Pandey D. M., Goswami C. L., Kumar B. (2001) Effect of plant growth regulators on photosynthesis in cotton (Gossypium hirsutum L.) under watterlogging. Ind. J. Plant Physiol. 6: 90-94.
- Pandey D. M., Goswami C. L., Sharma P. K. (2001) Effect of plant growth regulators on nitrate reductase activity in cotton under water stress. Ann. Agri-Bio Res. 6: 169-172.
- Pandey D. M. (2001) Photosynthetic response of three sugarcane (Saccharum offcinarum L.) cultivars in relation to waterlogging and planting methods. GEOBIOS 28: 113-116.
- Roy DK, Pandey DM (2000) Relative performance of moongbean genotypes in mixed cropping system with deep water rice in north Bihar. Crop Research (Hisar) 20(1): 62-67 (ISSN: 0970-4884, Record Number-20000711280.
- Pandey D. M., Pant R. C., Sharma M. (1997) Effect of waterlogging on some morphological characteristics in three cultivars of sugarcane (Saccharum offcinarum L.) under different planting method. Ann. Agri-Bio Res. 6: 105-108.
- Sharma M., Kumar B. and Pandey D. M. (1997) Effect of pre-flowering foliar application of putrecine on ion composition of seeds of chickpea (Cicer arietinum L. cv. H-82-2) raised under saline conditions. Ann. Agri-Bio Res. 6: 111-113.
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Presentations in Conferences/Workshop/FDP
2022
- D M Pandey (2022) Invited Talk on “Impact of soil acidity stress in rice: A computational and molecular approach”. In: VII International Conference on Sustainable Energy and Environmental Challenges (VII SEEC) Organized by Indian Institute of Technology- BHU, Varanasi, India from 16th December 2022 to 18th December 2022.
- D M Pandey (2022) Talk on “Identification and characterization of flavonol synthase gene from Millettia pinnata”. In: International Conference on sustainable bioresources and bioeconomy (BSBB-2022) organised at Indian Institute of Technology Guwahati, Assam, from December 07-11, 2022.
- D M Pandey (2022) Resource Person in Two days national meeting on ??? ??? ???? ???????? ?? ??? ?????????? ?????????: ????? ? ????????? ?????? at Nava Nalanda Mahavihara, Nalanda, India from October 10-11. 2022,
2021
- Pandey D. M. (2021) Application of bioinformatics in gene expression study In: Online FDP presentation on May 27, 2021 scheduled from 26-05-2021 to 04-06-2021 and organized by E & ICT Academy, National Institute of Technology, Warangal in association with University College of Engineering BIT Campus Tiruchirappalli – 620 024, India.
2020
- Pandey D.M. (2020) Cocoonase, sericin and degumming of silk cocoon: Computational and experimental. In: International Webinar on “Recent Advances in Science and Technology during the Coronavirus Pandemic” from 18-20 July, 2020 organized by Department of Chemistry, BIT Mesra, Ranchi - 835215, Jharkhand, India. Presentation date: July 20, 2020. Pp. 23.
- Pandey D.M.: Identification of low pH induced differentially expressed genes in rice: An experimental and computational. In: Plant Genomics 2020 (Webinar on Plant Genomics and Plant Science) organized by Meetings International Pte Ltd. at Osaka, Japan on May 26, 2020.
- Kumari K., Pandey J. P., Pandey D. M. (2020) “PRELIMINARY STUDY ON COCOONASE FROM RAILY ECORACE OF Antheraea mylitta USING MOLECULAR APPROACHES” In, 2nd International Conference on Bioprocess for Sustainable Environment and Energy (ICBSEE-2020) held on 5th-7th March, 2020 at Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela-769008, India.
- Pushprenu, Choudhary E., Pandey D.M. (2020) “Preliminary studies towards identification of low pH induced differentially expressed genes in rice” In, 2nd International Conference on Bioprocess for Sustainable Environment and Energy (ICBSEE-2020) held on 5th-7th March, 2020 at Department of Biotechnology and Medical Engineering, National Institute of Technology, Rourkela-769008, India
2019
- Pandey D. M.: “Future Perspectives of Phytopharmaceuticals” In: Developmental Path of Phytopharmaceuticals towards Future Perspective scheduled at Department of Pharmaceutical Sciences & Technology, BIT, Mesra, Ranchi, Jharkhand, India on February 07, 2019 during a AICTE-QIP program scheduled from February 01-15, 2019
- Pandey D. M.: “Biodiversity” in One Day Hindi Conference on “Climate Change & Biodiversity” scheduled at ICAR-Indian Institute of Natural Resins and Gums, Namkum, Ranchi India on 16-10-2019
- Aniket Sinha, Ekta, Vinod Kumar Nigam, Dev Mani Pandey (2019) “Preliminary study on tetrahydroberberine oxidase and berberine reductase enzymes for the enrichment of medicinally important component in Tinospora cordifolia (Willd.) Miers” in National Conference on Integrative Plant Biochemistry and Biotechnology at ICAR-Indian Institute of Rice Research, Hyderabad, from 8-9 November, 2019.
- Anand P, Pandey JP and Pandey DM (2019) Purification and degumming activity of Antheraea mylitta Cocoonase In: Proceedings of 2nd International Conference on Recent Trends in Bioengineering (ICRTB 2019) organized by MIT School of Bioengineering Sciences & Reserch at MIT-ADT University, Pune, India on February 16, 2019. Pp. 88.
- Rajani Kumari, Bobby Bharti, Pandey D. M. (2019) Study on cold stress responsive differentially expressed genes in rice cultivars. In: Proceedings of Genomics India-2019 scheduled at ITC Gardenia Bangalore, India from January 24-25, 2019, pP. 52.
2018
- Anand Preeti, Singh Shaifali, Pandey D. M. (2018) Unraveling the sequence similarities, phylogenetic analysis, 3d structure and conserve domain of lipoxygenase and hydroperoxide lyase in peanut: an in silico approach. In Proceedings of 2nd National Conference on Doubling Farmers Income for Sustainable & Harmonious Agriculture 'DISHA-2018' at Palash Sabhagaar Auditorium, ICAR-IINRG Ranchi, Jharkhand from August 11 -12, 2018.
- Ram Mousam Kumar, Mukherjee Koel, Pandey D. M. (2018) In-silico approach towards identification of miRNA, their targets and miPEPs in Arachis hypogaea L. In proceedings of 4th International Plant Physiology Congress (IPP Congress-2018) scheduled at CSIR-NBRI Lucknow India from December 2-5, 2018 (PJ32-IPC_2018_ABS_S2063).
2017
- Pandey D. M.: “Genomics in Drug Discovery” In: Rational Approach to Drug Development scheduled at Department of Pharmaceutical Sciences & Technology, BIT, Mesra, Ranchi, Jharkhand, India on December 07, 2017 during a AICTE-QIP program scheduled from June 02-15, 2017.
2016
- Prsasad Sneha, Pandey D. M. (2016) In silico characterization of cocoonase encoding gene from Antheraea mylitta. In proceedings of Cenetri Annual Life Sciences Conclave 2016 scheduled at Taj Vivanta, Hyderabad, India from December 15-16, 2016 by Cenetri Publishing Group, USA.
- Pandey D. M. “Biotechnology In India” on June 23, 2016 during Refresher course/ orientation program in Summer School from 10-06-2016 to 30-06-2016 at UGC-Human Resource Development Centre, Ranchi University, Ranchi, Jharkhand, India.
- Pandey Bharati, Gupta S, Rao RR, Pandey DM, Chatrath R. (2016) Molecular modeling and dynamics study of nonsynonymous SNP in bread wheat HSP16.9B gene. In proceedings of International Conference on Bioinformatics and Systems Biology (BSB-2016) scheduled at Varanasi, UP, India from March 04-06, 2016. IEEE Publisher.
- Kumar G., Pandey D.M. (2016) Traditional therapeutic plants as a potential source for contemporary rehabilitation” In: Proceedings of the “International Symposium on Role of Herbals in Cancer Prevention and Treatment” scheduled at Jawaharlal Nehru University, New Delhi, India during 09th to 10th February, 2016.
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2015
- Pandey D. M.: “Bioinformatics Approaches in Agricultural & Medicinal Plants” on December 04, 2015 on the occasion of one week BTISNet sponsored workshop on “EMERGING TECHNIQUES IN BIOINFORMATICS AND ITS’ APPLICATION at Department of Bio-Engineering, B.I.T. Mesra, Ranchi, India.
- Wany A., Nigam V.K., Jha Shivesh., Pandey D.M. (2015) Enrichment of essential oil components in Citronella (Cymbopogon winterianus Jowitt): A novel approach. In: 9th Biotechnology Congress-2015 organized at Hyatt Regency Orlando International Airport, Orlando, Florida, USA, from August 31, 2015 to September 02, 2015.
- Pandey D.M. (2015) Landmark of Real Time PCR in differential analysis of genes in some crops. In: qPCR and dPCR Conference -2015 organized at Hotel Fort Canning, Singapore from May-21-22, 2015.
- Prajapati G.K., Kumar A., Pandey D.M. (2015) Identification of GCC box and TCC box promoter motifs in differentially expressed genes using Molecular Beacon probe based Real Time PCR assay and in silico protein DNA interaction in rice. In: Advances in qPCR and dPCR Conference -2015 organized at Hotel Fort Canning, Singapore from May-21-22, 2015. Poster No. 1001.
- Pandey J.P., Sinha AK, Kundu P, Pandey D.M. (2015) Physiochemical and proteomic depiction of Antheraea mylitta cocoonase. In: Indian Genetics Congress-2015 (IGC-2015) organized at SRM University, Tamil Nadu, India from March 04-06, 2015. Poster No. IGCA003. P59.
- Kumari D, Kumari S, Ram MK, Kumari A, Pandey D.M. (2015) In silico study on prediction of miRNAs and their related SNPs in Arachis hypogaea L. In: 5th International Conference on Next Generation Genomics and Integrated Breeding for Crop Improvement (NGGIBCI-V) organized at ICRISAT, Patancheru, India from February 18 to 20, 2015.
- Kumari R, Prajapati GK, Wany A, Prasad Sneha, Kumar Mousam, Pandey D.M. (2015) Differential expression of some genes undr cold stress in rice cultivars. In: 2nd International Conference on Biotechnology and Bioinformatics (ICBB-2015) organized at International Center for Stem Cells, Cancer and Biotechnology (ICSCCB), Pune, India from February 06-08, 2015.
2014
- Prajapati GK, Kumar A, Pandey D. M. (2014) Molecular Beacon Probe–Based Real Time PCR Assay for the Identification of Promoter Motifs in Rice. In: 2nd qPCR & Digital PCR Congress - 2014 scheduled at London Marriot Hotel, London, UK from October 20-21, 2014.
- Pandey D. M.: “Bioinformatics Approaches in Agricultural and Medicinal Plants” In: Application of Biotechnology in Modern Pharmacognosy scheduled at Department of Pharmaceutical Sciences, BIT, Mesra, Ranchi, Jharkhand, India on December 11, 2014.
- Pandey D. M.: “Bioinformatics Approaches in Agricultural Crops” In: “Introduction to Bioinformatics and Biomedical Informatics” scheduled at “Department of Biochemistry cum Biomedical Informatics Centre (ICMR), Rajendra Institute of Medical Science (RIMS), Ranchi, Jharkhand, India on November 28, 2014.
2013
- Saumya Ghosh Dastidar, Aakanksha Wany, Archana Kumari, Pandey D. M. (2013) A preliminary study on improving flavouring acceptability of peanut oil (Arachis hypogaea L.)- In silico approach. In: The National Symposium on "Emerging Trends in Agri-Bioinformatics” (ETAB) 2013 organized by DWR, Karnal, Haryana, India from December 16-17, 2013.
- Pandey D. M. (2013) 11th International Symposium on Rice Functional Genomics at Grand Hotel, New Delhi, India from November 20-23, 2013.
- Kumar A., Heuer S., Vidyarthi A.S. and Pandey D. M. (2013) Unraveling the regulatory role of transcription factors for enhancing the tolerance level conferred by Sub1A in rice: An in silico approach. In: 7th International Rice Genetics Symposium -2013 (RG7) scheduled at Dusit Thani Hotel, Manila, Philippines from November 05-08, 2013. Pp. 313.
- Prajapati, G.K., Kumar A. and Pandey D. M. (2013) Molecular Beacon probe based promoter motif detection & in silico protein-DNA interaction studies during submergence in rice (Oryza sativa L.). In: 7th International Rice Genetics Symposium -2013 (RG7) scheduled at Dusit Thani Hotel, Manila, Philippines from November 05-08, 2013. Pp. 233.
- Ranjan A, Kumari A, Kumar A, Wany A, Vidyarthi AS, Pandey D. M. (2013, Abstract only) In silico identification and annotation of some stress responsive genes in peanut ESTs. In: Proceedings of First Legume Society Conference 2013: A Legume Odyssey. Novi Sad, Serbia, 9-11 May 2013. Pp. 171.
2012
- Pandey D. M., Kumar A., Prajapati, G.K., Kumari A, Wany A. (2012) Computational and Molecular Biology Approaches for Plant Research & Improvement. In: International Conference on Industrial Biotechnology (ICIB-2012) & 9th Convention of The Biotech Research Society, India held at Punjabi University, Patiala, India from November 21-23, 2012. IL-57, Pp 37.
- Kumari A, Kumar A, Wany A, Prajapati, G.K. and Pandey D. M. (2012) Identification and annotation of abiotic stress responsive candidate genes in peanut ESTs. In: VI International Conference in Legume Genetics and Genomics held on October 02-07, 2012, Hyderabad, AP, India. Poster No. ABS-18, Pp 98.
- Pandey D. M., Kumar A, Prajapati, G.K., Kumari A, Wany A. (2012) Unraveling of Integrated Mechanisms in OMICS Technology for Crop Improvement. In: 3rd World Congress on Biotechnology (Biotechnology-2012) held at Hyderabad International Convention Center, Hyderabad, India from September 13-15, 2012. J Biotechnol Biomater Volume 2 Issue 6-166.
- Sinha A., Kumar A., Wany A., Pandey D. M. (2012) Homology Modeling and Molecular Docking on Activators of Tetrahydroberberine Oxidase in Tinospora. In: World Congress on Biotechnology held on May 4-6, 2012, Hyderabad. Pp. 90.
- Khemka N.K., Kumar A., Prajapati G.K., Wany A., Kumari A., Pandey D.M. (2012) Study on enzyme and its coding gene responsible for medicinal importance in Tinospora cordifolia. In: International conference on current trends in Medicinal Plant Research, University of Pune, Pune, India on January 10-12, 2012. P-19.
- Wany A., Kumar A., Vidyarthi A. S., Nigam V. K. and Pandey D. M. (2012) Understanding New Paradigm of Plant Metabolomes through Secondary Metabolite Enrichment. In: Current Trends in Medicinal Plant Research, University of Pune, Pune on January 10-12, 2012.P – 20.
2011
- Kumar A., Malathi V. G., Mathew J., Abraham T., Pandey D. M. and Ramachandran P. (2011) Identification and characterization of viroid associated with tapping panel dryness syndrome in Hevea brasiliensis. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Page No.: 17.
- Pandey B., Varshney J., Sharma H., Sheoran S., Singh R., Chatrath R., Pandey D. M. and Sharma P. (2011) Comparative analysis of AP2/EREBP gene family in selected plants. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Page No.: 42.
- Smita S., Katiyar A., Pandey D. M., Chinnusamy V. and Bansal K. C. (2011) Analysis of abiotic stress responsive gene network in Oryza sativa. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Poster No.: BSB-04, Page No.: 108.
- Katiyar A., Smita S., Pandey D. M., Chinnusamy V. and Bansal K. C. (2011) Computational pipeline for screening new miRNAs and their target genes in agricultural crops. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Poster No.: BSB-05, Page No.: 109.
- Prasad D.,Vidyarthi A. S., Trentin A.R., Pandey D. M. and Masi A. (2011) Multiple gene silencing by RNAi for assessing the functions of the gamma-glutamyl cycle in Arabidopsis thaliana plants. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Poster No.: FG-02, Page No.: 111.
- Kumar A., Heuer S. and Pandey D. M. (2011) In Silico Study on Differentially Co-Expressed Transcription Factor Genes Enriched by Promoter Motifs in Rice (Oryza sativa L.) under Submergence. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Poster No.: BSB06, Page No.: 110.
- Shamim G., Ranjan S. K., Pandey D. M. and Ramani R. (2011) Polyketide pathway in anthraquinone biosynthesis: A comparative analysis in phylogenetically diverse organisms. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Poster No.: Poster No.: BSB04, Page No.: 110.
- Mishra A., Ghosh S. (Sachan), Pandey D. M. (2011) Studies on rhizosphere associated micro-organism to improve crop production. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Poster No.: CI-40, Page No.: 99.
- Kumari A., Kumar A. and Pandey D. M. (2011) Co-Expression networking on less informative transcription factor genes in rice (Oryza sativa L.) under abiotic stresses. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Poster No.: BSB-01, Page No.: 107.
- Prajapati G.K., Kumar A. and Pandey D. M. (2011) Study on Expression Analysis of DEG with Respect to GCC-Box and TCC-Box in Rice (Oryza sativa L.) under Anoxia. In: International Symposium on Plant Biotechnology towards Tolerance to Stresses and Enhancing Crop Yield (ISPB-2011) at BIT, Mesra, Ranchi on September 28 - October 1, 2011. Poster No.: FG03, Page No.: 112.
2010
- Malathi V.G., Kumar A., Ramachandran P., Mathew J., Abraham T. and Pandey D. M. (2010) The Detection of Viroids in Tapping Panel Dryness of Rubber by Return-Polyacrylamide Gel Electrophoresis (R-PAGE) and RT-PCR. In: 51st Annual Conference of Association of Microbiologist of India (AMI) International Symposium on Cross disciplinary Microbiology: Future Avenues and Challenges [AMI 2010] from December 14-17, 2010 at BIT Mesra, Ranchi, Jharkhand, India. Poster No.: ASM 69. Pp. 60.
- Mishra A., Pandey D. M., Ghosh (Sachan) S, Kumar A., Gupta N. C. and Sahi D.K. (2010) Dynamics of Plant Growth Promoting Rhizobacteria in Maize Crop of Jharkhand. In: 51st Annual Conference of Association of Microbiologist of India (AMI) International Symposium on Cross disciplinary Microbiology: Future Avenues and Challenges [AMI 2010] from December 14-17, 2010 at BIT Mesra, Ranchi, Jharkhand, India. Poster No.: ASM 71. Pp. 61.
- Kumar A., Kanchan Y., Kumari V., Prasad D., Prajapati G.K., Sahu V., Vidyarthi A.S. and Pandey D. M. (2010) Molecular biology approaches on geraniol dehydrogenase encoding gene in citronella (Cymbopogon winterianus). National Conference of Plant Physiology on Physiological and Molecular Approaches for Crop Improvement under Changing Environment at B.H.U., Varanasi, India from November 25-27, 2010. Poster no. 09-16.
- Kumar P., Kumar V., Kumar A., Vidyarthi A.S. and Pandey D. M. (2010) Identification of Retented Introns, Weak Splice Sites and Their Mechanism in Rice (Oryza sativa L.) Genome: An In Silico Approach. In: 3rd International Rice Congress- 2010, Hanoi, Vietnam from November 8-12, 2010. Poster no. 4359.
- Kumar A., Kumar V., Kumar P., Agarwal S.K., Baxi A., Megha, Vidyarthi A.S., Pandey D. M. (2010) Study on Molecular Mechanism towards Submergence Tolerance in Rice (Oryza sativa L.): A Functional Genomics Approach In: Proceedings of National Seminar on Applications of Biotechnology & The Development of Bihar, B.I.T. Patna, Bihar, India from March 22-24, 2010. Poster No.: 15, Page 64. (Best Poster Presentation Award.
- Pandey D. M.: “Effect of Environmental Stresses on Agricultural Productivity of Bihar and Their Improvement: A Biotechnological Approach” at National Seminar on Applications of Biotechnology and Development of Bihar scheduled at BIT, Patna, Bihar, India from March 20-22, 2010.
2009
- Kumar A., Kumari A., Agarwal S. K., Baxi A., Vidyarthi A.S., Pandey D. M. (2009) Expression Analysis of Two Component System Genes in Rice (Oryza sativa .L) under Submergence. In: Proceedings of 6th Rice Genetics Symposium and 7th International Symposium on Rice Functional Genomics (ISRFG’2009) scheduled at Manila, Philippines from Nov 16-19, 2009. Poster No.: P4-96, Page 345.
- Rani S., Srivastava J., Kumar A., Kumar V, Kumar P., Vidyarthi A.S., Pandey D. M. (2009) In Silico Study on Intron Retention in Alternatively Spliced Genes of Rice (Oryza sativa L.) and Their Response under Anoxia. In: Proceedings of 6th Rice Genetics Symposium and 7th International Symposium on Rice Functional Genomics (ISRFG’2009) scheduled at Manila, Philippines from Nov 16-19, 2009. Poster No. P4-97, Page 345-346.
- Kumar A, Barik A, Vidyarthi AS, Pandey D. M. (2009) In silico prediction and identification of anoxia responsive single exon genes in rice (Oryza sativa L.) In Plant Abiotic Stress Tolerance, Congress-2009, scheduled at Vienna, Austria scheduled on 9-11 Feb., 2009, P-N256.
2008
- Kumar A, Barik A, Vidyarthi Ambarish S, Pandey D. M. (2008, Abstract only): In Silico Prediction and Identification of Anoxia Responsive Single Exon Genes in Rice (Oryza sativa L.). 6th International Symposium on Rice Functional Genomics scheduled at Jeju, South Korea from November 10-12, 2008, P 48.
2007
- Pandey D. M., Deb R, Kumar A, Vidyarthi AS and Kim S-R (2007) Study on the Functional Characterization of low oxygen stress inducible genes in rice (Oryza sativa L.). 5th International Symposium on Rice Functional Genomics at Epochal, Tsukuba, Japan from October 15-17, 2007. Poster No. 110.
- Kumar A, Shankaracharya, Vidyarthi AS and Pandey D. M. (2007) In-Silico Analysis of Promoter Motif of Anoxia Inducible Genes in Rice Oryza sativa L.). 5th International Symposium on Rice Functional Genomics at Epochal, Tsukuba, Japan from Oct. 15-17, 2007. Poster No. 112.
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